Genetics University — Research, Education, Medical Genetics
Knowledge Hub

Gene entry

SYNGAP1

synaptic Ras GTPase activating protein 1

Chromosome
6
Cytoband
6p21.32
Variants (rsID)
14

SYNGAP1 is a protein-coding gene, meaning the body reads it as instructions to build a protein, located on chromosome 6 (region 6p21.32). Its official name is “synaptic Ras GTPase activating protein 1”. The reference table lists 14 variants (rsID) for this gene.

Clinically classified variants

7 reference-table entries with clinical significance.

  • rs145694123Benignsingle nucleotide variantIntellectual disability, autosomal dominant 5|History of neurodevelopmental disorder
  • rs191549504Benignsingle nucleotide variantIntellectual disability, autosomal dominant 5|History of neurodevelopmental disorder
  • rs411136Benignsingle nucleotide variantHistory of neurodevelopmental disorder|Intellectual disability, autosomal dominant 5
  • rs375587730Conflicting interpretationssingle nucleotide variantIntellectual disability, autosomal dominant 5|History of neurodevelopmental disorder
  • rs397514670Conflicting interpretationssingle nucleotide variantIntellectual disability, autosomal dominant 5|Inborn genetic diseases|Complex neurodevelopmental disorder|SYNGAP1-related developmental and epileptic encephalopathy
  • rs869312674Conflicting interpretationssingle nucleotide variantIntellectual disability, autosomal dominant 5|Intellectual disability
  • rs121918316Pathogenicsingle nucleotide variantIntellectual disability, autosomal dominant 5

Other listed variants

Public references

Data from the institutional reference table and public NCBI annotation. For education only; not a substitute for medical or genetic counselling.