Genetics University — Research, Education, Medical Genetics
Knowledge Hub

Gene entry

SMC1A

structural maintenance of chromosomes 1A

Chromosome
X
Cytoband
Xp11.22
Variants (rsID)
7

SMC1A is a protein-coding gene, meaning the body reads it as instructions to build a protein, located on chromosome X (region Xp11.22). Its official name is “structural maintenance of chromosomes 1A”. The reference table lists 7 variants (rsID) for this gene.

Clinically classified variants

5 reference-table entries with clinical significance.

  • rs144354524Conflicting interpretationssingle nucleotide variantCongenital muscular hypertrophy-cerebral syndrome
  • rs377270943Conflicting interpretationssingle nucleotide variantCongenital muscular hypertrophy-cerebral syndrome|History of neurodevelopmental disorder
  • rs387906702Pathogenicsingle nucleotide variantCongenital muscular hypertrophy-cerebral syndrome|Inborn genetic diseases
  • rs727503773PathogenicMicrosatelliteCongenital muscular hypertrophy-cerebral syndrome|6 conditions
  • rs863225458PathogenicDeletionCongenital muscular hypertrophy-cerebral syndrome|Developmental and epileptic encephalopathy, 85, with or without midline brain defects

Other listed variants

Public references

Data from the institutional reference table and public NCBI annotation. For education only; not a substitute for medical or genetic counselling.