Gene entry
NRXN1
neurexin 1
- Chromosome
- 2
- Cytoband
- 2p16.3
- Variants (rsID)
- 270
NRXN1 is a protein-coding gene, meaning the body reads it as instructions to build a protein, located on chromosome 2 (region 2p16.3). Its official name is “neurexin 1”. The reference table lists 270 variants (rsID) for this gene.
Clinically classified variants
39 reference-table entries with clinical significance.
- rs1045881Benignsingle nucleotide variantPitt-Hopkins-like syndrome 2
- rs113380721Benignsingle nucleotide variantPitt-Hopkins-like syndrome 2|History of neurodevelopmental disorder
- rs115211871Benignsingle nucleotide variantPitt-Hopkins-like syndrome 2|History of neurodevelopmental disorder
- rs116236999Benignsingle nucleotide variantPitt-Hopkins-like syndrome 2|History of neurodevelopmental disorder
- rs147984237Benignsingle nucleotide variantPitt-Hopkins-like syndrome 2|History of neurodevelopmental disorder
- rs200248561Benignsingle nucleotide variantHistory of neurodevelopmental disorder|Pitt-Hopkins-like syndrome 2
- rs201592993Benignsingle nucleotide variantPitt-Hopkins-like syndrome 2
- rs2287235Benignsingle nucleotide variantPitt-Hopkins-like syndrome 2
- rs56086732Benignsingle nucleotide variantHistory of neurodevelopmental disorder|Pitt-Hopkins-like syndrome 2
- rs67661616Benignsingle nucleotide variantPitt-Hopkins-like syndrome 2
- rs78540316Benignsingle nucleotide variantPitt-Hopkins-like syndrome 2|History of neurodevelopmental disorder
- rs9636391Benignmissense_variantPitt-Hopkins-Like Syndrome 2|Silent
- rs112536447Conflicting interpretationssingle nucleotide variantPitt-Hopkins-like syndrome 2|History of neurodevelopmental disorder
- rs143446587Conflicting interpretationssingle nucleotide variantPitt-Hopkins-like syndrome 2|History of neurodevelopmental disorder
- rs143495349Conflicting interpretationssingle nucleotide variantHistory of neurodevelopmental disorder|Pitt-Hopkins-like syndrome 2
- rs144049982Conflicting interpretationssingle nucleotide variantPitt-Hopkins-like syndrome 2|History of neurodevelopmental disorder
- rs192909520Conflicting interpretationssingle nucleotide variantHistory of neurodevelopmental disorder|Pitt-Hopkins-like syndrome 2
- rs199557987Conflicting interpretationssingle nucleotide variantPitt-Hopkins-like syndrome 2
- rs199784029Conflicting interpretationssingle nucleotide variantChromosome 2P16.3 deletion syndrome|Pitt-Hopkins-like syndrome 2|History of neurodevelopmental disorder|Pitt-Hopkins-like syndrome 2|Intellectual disability
- rs199934259Conflicting interpretationssingle nucleotide variantPitt-Hopkins-like syndrome 2
- rs200115353Conflicting interpretationssingle nucleotide variantPitt-Hopkins-like syndrome 2
- rs200182626Conflicting interpretationssingle nucleotide variantHistory of neurodevelopmental disorder|Pitt-Hopkins-like syndrome 2
- rs200335720Conflicting interpretationssingle nucleotide variantPitt-Hopkins-like syndrome 2
- rs200464704Conflicting interpretationssingle nucleotide variantPitt-Hopkins-like syndrome 2
- rs200698497Conflicting interpretationssingle nucleotide variantHistory of neurodevelopmental disorder|Pitt-Hopkins-like syndrome 2
- rs201485014Conflicting interpretationssingle nucleotide variantPitt-Hopkins-like syndrome 2
- rs201727684Conflicting interpretationssingle nucleotide variantHistory of neurodevelopmental disorder|Pitt-Hopkins-like syndrome 2
- rs201837579Conflicting interpretationssingle nucleotide variantHistory of neurodevelopmental disorder|Pitt-Hopkins-like syndrome 2
- rs201886024Conflicting interpretationssingle nucleotide variantPitt-Hopkins-like syndrome 2
- rs201941844Conflicting interpretationssingle nucleotide variantHistory of neurodevelopmental disorder|Pitt-Hopkins-like syndrome 2
- rs202006815Conflicting interpretationssingle nucleotide variantPitt-Hopkins-like syndrome|Pitt-Hopkins-like syndrome 2
- rs398123573Conflicting interpretationssingle nucleotide variantPitt-Hopkins-like syndrome 2
- rs55640811Conflicting interpretationssingle nucleotide variantHistory of neurodevelopmental disorder|Pitt-Hopkins-like syndrome 2
- rs55923848Conflicting interpretationssingle nucleotide variantHistory of neurodevelopmental disorder|Pitt-Hopkins-like syndrome 2
- rs563089155Conflicting interpretationssingle nucleotide variantHistory of neurodevelopmental disorder|Pitt-Hopkins-like syndrome 2
- rs587781101Conflicting interpretationssingle nucleotide variantPitt-Hopkins-like syndrome 2
- rs75137449Conflicting interpretationssingle nucleotide variantPitt-Hopkins-like syndrome 2
- rs751894635Conflicting interpretationssingle nucleotide variantPitt-Hopkins-like syndrome 2
- rs75809661Likely benignsingle nucleotide variant
Other listed variants
- rs2473
- rs523003
- rs563148
- rs858927
- rs858951
- rs968972
- rs973354
- rs985919
- rs990024
- rs991566
- rs994991
- rs1019318
- rs1104979
- rs1160595
- rs1452786
- rs1520446
- rs1563020
- rs1715970
- rs1829534
- rs1879340
- rs1882296
- rs1895130
- rs1915219
- rs1915222
- rs1915234
- rs2113404
- rs2193225
- rs2193410
- rs2193417
- rs2194386
- rs2216252
- rs2216789
- rs2241750
- rs2287234
- rs2351152
- rs2351765
- rs3850338
- rs3861561
- rs4377361
- rs4971552
- rs6545163
- rs6545176
- rs6545181
- rs6706472
- rs6718248
- rs6721498
- rs6731061
- rs6733430
- rs6749209
- rs6754640
- rs6756219
- rs7578902
- rs7583273
- rs7586095
- rs7587012
- rs7589123
- rs7592022
- rs7592364
Public references
Data from the institutional reference table and public NCBI annotation. For education only; not a substitute for medical or genetic counselling.